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SVI Image Gallery 1


Image Description
Image Fibroblast cells stained for mitochondria and nuclei. 20x air (0.7 NA) Leica widefield image of living human fibroblast cells stained for mitochondria (Mitotracker green, Invitrogen Inc.) and nuclei (Hoechst). Z stack fluorescent channels were deconvolved in Huygens Essential, then the mitochondrial channel was processed in Object Analyzer to identify the number of mitochondrial objects per cell. Resulting objects were separately color coded and overlaid with a maximum projection of the nuclei, and the in focus DIC image.

Image created by Dr. Glyn Nelson, University of Newcastle upon Tyne, UK

Image The Power of Deconvolution. Experimental point spread functions were generated for the red, green, and blue channels on an epifluorescence microscope and then used to deconvolve a standard Invitrogen Floucells #1 prepared slide, containing bovine pulmonary artery endothelial cells stained for mitochondria (red), F-actin (green), and nuclei (blue). Before (left) and after (right) deconvolution images were merged side by side to display the power of deconvolution.

Image created by Dr. Jeff Tucker and Dr. Holly Rutledge from NIEHS, NIH, USA

Image Deconvolved and MIP rendered image of a dendritic tree of a cultured hippocampal neuron. Primary hippocampal neuronal culture from P1 C56Bl/6H mice, grown on glass bottom dishes, imaged live in aqueous medium, expressing CMV-driven mCherry (red) and mouse diacylglycerol lipase (with pAcGFP, green) Images were recorded with 1,4 NA 60x oil immersion objective on a Nikon Ti-E inverted microscope using a spectral detector.

Image recorded by Barna Dudok MSc., Hungarian Academy of Sciences, Hungary

Image Inhibitory axon terminals at the pyramidal layer of CA1 area of the hippocampus. A subset of terminals is immunostained for parvalbumin (blue), while another population is labeled with CB1 cannabinoid receptor (green) and VGluT3 vesicular glutamate transporter (red). The receptor is on the cell membrane while vesicular transporter is present intracellularly. Slice view of a Huygens deconvolved confocal stack from a Nikon Ti-E, using Nikon A1R 4 channel detector unit.

Image recorded by Barna Dudok MSc., Hungarian Academy of Sciences, Hungary

Image Chromatic shift between blue and red channel. A chromatic shift between blue and red stained centromeric satellite repeat regions can be clearly distinguished. (see also Chromatic Shift Corrector.

Recorded by Dr. Mariette Kemner-van de Corput, Dept. of Cell Biology & Genetics, Erasmus Medical Center, Rotterdam, The Netherlands

Image SFP rendered image of blurred beads in raw confocal data. Raw confocal image data of sub-resolution multi-colored beads shows extensive blurring. Note the apparent blurring in the axial (Z) direction.

Recorded by Dr. Mariette Kemner-van de Corput, Dept. of Cell Biology & Genetics, Erasmus Medical Center, Rotterdam, The Netherlands

Image Detail of an imaginal disc(external link) from a third instar Drosophila Melanogaster(external link) larva. Left: a slice of the original data, imaged using an Andor Revolution spinning disc confocal microscope.Right: the same slice, deconvolved using Huygens Professional. The fixed sample was stained against alfa-tubulin (green) and gamma-tubulin (red).

Recorded by Dr. Paula Sampaio, Advanced Light Microscopy Facility, University of Porto.


Image Gamma tubulin(external link) fiber structure in an imaginal disc. Left: SFP rendering of the original data, imaged using an Andor Revolution spinning disc confocal microscope. Right: SFP rendering of the same data, deconvolved using Huygens Professional.

Recorded by Dr. Paula Sampaio, Advanced Light Microscopy Facility, University of Porto.

Image Jurkat T-cell(external link) making contact with a Raji B-cell, stained for Raji cytosol (FURA-2, blue), T-cell receptor (anti-CD3 Alexa647, green), and Actin (Lifeact-mRFPruby, red) Left: Maximum intensity projections (XZ, XY, ZY) of the original data, imaged using a Zeiss Cell Observer HS system at 37ºC with a 40x Fluor 1.3 oil lens. This is a single frame from a time lapse acquisition. Right: Deconvolved using Huygens Essential. In the time series a ring-like pattern of Actin and a bulls-eye pattern of CD3 can be seen, accumulating at the contact-site (the immunolgical synapse(external link)). Both structures gave us a hint that the T-cell was activated properly."

Recorded by Christian Junker M.Sc., Institut für Biophysik, University of Saarland, Germany.

Image Macrophage fluorescently stained for tubulin (yellow), actin (red) and the nucleus (DAPI, blue). Left: original image, recorded with a wide field microscope. Right: the same dataset, deconvolved using Huygens Professional. The datasets are visualized with top-view maximum intensity projections.

Data courtesy of Dr. James Evans, Whitehead Institute, MIT Boston MA, USA. (See the EvansMacrophage for more image details).

Image Cell nuclei labelled with Draq5 (XY slice) Left: a slice of the original data, imaged using an inverted Leica TCS SP2 AOBS confocal microscope. Right: the same slice, deconvolved using Huygens Professional. This image was used to test an automatic nuclei counting algorithm. Huygens deconvolution enhances the performance of this method.
%% Recorded by Dr. Nicolas Fête, Laboratory of Stem Cells Dynamics, Swiss Federal Institute of Technology of Lausanne.

Image Cell nuclei labelled with Draq5 (axial XZ slice) Left: a slice of the original data, imaged using an inverted Leica TCS SP2 AOBS confocal microscope. Right: the same slice, deconvolved using Huygens Professional. This image was used to test an automatic nuclei counting algorithm. Huygens deconvolution enhances the performance of this method.

Recorded by Dr. Nicolas Fête, Laboratory of Stem Cells Dynamics, Swiss Federal Institute of Technology of Lausanne

Image SFP rendering of a cell cluster. The XY and XZ slices in the previous images are part of this dataset. In the SFP volume rendering algorithm the data is taken as a distribution of fluorescent dye. By modeling a physical light/matter interaction process an image is computed showing the data as it would have appeared in reality when viewed under these conditions.

The original data is recorded by Dr. Nicolas Fête, Laboratory of Stem Cells Dynamics, Swiss Federal Institute of Technology of Lausanne.

Image Axial image of an isolated rat Hepatocyte(external link) couplet. Left: an XZ slice of the original confocal 3D image. Right: the same XZ slice after restoring the whole stack with the Huygens Software. The data shows two adhering liver cells stained with phalloidin for actin(external link) (red), tubulin(external link) (blue) and dextran as a marker for endocytosis(external link) (green).

Data recorded by Dr. Permsin Marbet at the Department of Anatomy, University of Basel, Switzerland, in the lab of Prof. Lukas Landmann. (See MarbetHepatocyte for more details).

Image 4Pi two-photon image of F-actin(external link) filaments of a mouse skin fibroblast cell(external link). Left: a 'conventional' confocal image. Right: the restored 4Pi two-photon image. Both 3D-images were recorded at the same site of the specimen to allow a direct comparison of both methods. The F-actin fibers are directed along the Y-axis, i.e., perpendicular to the axial image. The 4Pi-confocal restored image reveals more details of the object than the confocal counterpart as a result of the improved 3D-resolution. The actin fiber in the center is substantially better resolved. The axial FWHM resolution in the restored 4Pi image was shown to be 70nm.

Data courtesy of Prof. Stefan W. Hell, Nano Biophotonics group, Max Planck Institute.





More deconvolution and visualization examples can also be found on the RestorationExamples page in our support wiki.