References to SVI software
Quite some scientific papers mention SVI's Software. The links below point to an overview of these papers. More information on our software can be found in those articles. If you used a SVI product in a publication we would highly appreciate it if you would send the reference to support
.What follows are mostly references that Huygens users asked to be included here, but many others are available for example in Google Scholar
.Table of contents
Remote management
^A. Ponti, A. Gulati, V. Bäcker and P. Schwarb.Huygens Remote Manager, a Web Interface for High-Volume? Batch Deconvolution.
Imaging & Microscopy (2007) V 9, No. 2, pp 57-58.
unabridged version
(distributed with permission)Theoretical PSFs versus measured PSFs
Deconvolution improves colocalization analysis of multiple fluorochromes in 3D confocal data sets more than filtering techniques
Jo. Micr. (2002) V 208, Pt 2, pp 134-147
Imaging properties in two-photon excitation microscopy and effects of refractive-index mismatch in thick specimens
Applied Optics (1999) V 38, No.28, pp
Deconvolution Combined with Digital Colocalization Analysis to Study the Spatial Distribution of Tight and Adherens Junction Proteins
Jo. of Computer-Assisted? Micr. (1998) V10 No. 3, pp 103-111
Avalanche photodiode detection with object scanning and image restoration provides 2-4 fold resolution increase in two-photon fluorescence microscopy
Bioimaging 4 (1996) pp 187-197 get pdf
^Huygens Analysis Tools (colocalization, object analysis...)
^Dupuis J, Préfontaine A, Villeneuve L, Ruel N, Lefebvre F, Calderone A.Bone marrow-derived progenitor cells contribute to lung remodelling after myocardial infarction.
Cardiovasc Pathol. 2007 Nov-Dec?;16(6):321-8.
get pdf
IQGAP1 stimulates actin assembly through the N-WASP-ARP2/3 pathway.
J. Biol. Chem, 10.1074
get pdf
Deconvolution improves colocalization analysis of multiple fluorochromes in 3D confocal data sets more than filtering techniques
Jo. Micr. (2002) V 208, Pt 2, pp 134-147
Deconvolution Combined with Digital Colocalization Analysis to Study the Spatial Distribution of Tight and Adherens Junction Proteins
Jo. of Computer-Assisted? Micr. (1998) V10 No. 3, pp 103-111
Some references to the Visualization Tools
Angiopoietin-mediated endothelial P-selectin translocation: cell signaling
mechanisms.
J Leukoc Biol. 2007 Nov 5
The lipid droplet binding domain of hepatitis C virus core protein is a major determinant for efficient virus assembly
J. Biol. Chem, 10.1074/get pdf
Trypanosoma cruzi disrupts myofibrillar organization and intracellular calcium levels in mouse neonatal cardiomyocytes
Cell Tissue Res (2006) artId 152
Velocity Estimation of Spots in Three-Dimensional? Confocal Image Sequences of Living Cells
Cytometry (2001) 43 pp 261-272
Spectral Volume Rendering
IEEE Transactions On Visualization And Computer Graphics (2002) VOL. 6, NO. 3 pp 196-207
Fast volume render techniques for interactive analysis
The Visual Computer (1997) 13 pp 345-358
Theses
Untersuchungen zur Anordnung von Makro- und Mikrochromosomen im Zellkern embryonaler Fibroblasten und Neuronen von Gallus domesticus.
Dissertation zum Erwerb des Doktorgrades der Medizin an der Medizinischen Fakultät der Ludwig-Maximilians-Universität? zu München.
get pdf
Computational and Optical Methods for Improving Resolution and Signal Quality in Fluorescence Microscopy. Technische Universiteit Delft. abstract and pdf
Papers with references to Huygens deconvolution
2011
Aurora A and Aurora B jointly coordinate chromosome segregation and anaphase microtubule dynamics. Includes cover image that was deconvolved with Huygens.
J Cell Biol. 2011 Dec 26;195(7):1103-13
Endoplasmic reticulum localization of DHHC palmitoyltransferases mediated by lysine-based sorting signals.
J Biol Chem. 2011 Nov 11;286(45):39573-84
The palmitoyl transferase DHHC2 targets a dynamic membrane cycling pathway: regulation by a C-terminal domain.
Mol Biol Cell. 2011 Jun 1;22(11):1887-95
Automated feature detection and imaging for high-resolution screening of zebrafish embryos.
BioTechniques, Vol. 50, No. 5, May 2011, pp. 319–324
Activation of G-Protein-Coupled? Receptors in Cell-Derived? Plasma Membranes Supported on Porous Beads.
J Am Chem Soc. 2011 Oct 26;133(42):16868-74
Differential control of Eg5-dependent centrosome separation by Plk1 and Cdk1.
The EMBO Journal (2011) 30, 2233 - 2245, Published online 26 April, 2011
This paper nicely describes the use of Huygens Deconvolution for images acquired with a DeltaVision? microscope
Hepatitis C virus receptors claudin-1 and occludin after liver transplantation and influence on early viral kinetics.
Hepatology (2011) May;53(5):1436-1445
Retromer terminates the generation of cAMP by internalized PTH receptors.
Nature Chemical Biology 2011 March 27; (7):278-284
Diacylglycerol kinase α regulates the formation and polarisation of mature multivesicular bodies involved in the secretion of Fas ligand-containing exosomes in T lymphocytes.
Cell Death and Differentiation 2011 Jan 21, advance online publication
Quantitative immunofluorescence mapping reveals little functional
coclustering of proteins within platelet α-granules.
Blood 2011 118: 1370-1373.Prepublished online May 26, 2011
2010
Inversin relays Frizzled-8 signals to promote proximal pronephros development.
Proc Natl Acad Sci U S A. 2010 Nov 23;107(47):20388-93
Palmitoylation of the SNAP25 protein family: specificity and regulation by DHHC palmitoyl transferases.
J Biol Chem. 2010 Aug 6;285(32):24629-38
cAMP/PKA signaling balances respiratory activity with mitochondria dependent apoptosis via transcriptional regulation
BMC Cell Biology 2010, 11:92
Vinculin potentiates E-cadherin mechanosensing and is recruited to actin-anchored sites within adherens junctions in a myosin II-dependent manner.
J Cell Biol. 2010 Jun 28;189(7):1107-15.
Vesicular Calcium Regulates Coat Retention, Fusogenicity, and Size of Pre-Golgi? Intermediates
Mol. Biol. Cell 10.1091/mbc.E09-10-0914
J. Neurosci. 2010, Jan 6;30(1):70-80.
2009
Analysis of replication factories in human cells by super-resolution light microscopy
Open access article
PMID: 19884508 (Pub Med - as supplied by publisher)
Oscillatory recruitment of signaling proteins to cell tips promotes coordinated behavior during cell fusion.
abstract
iLAP: a workflow-driven software for experimental protocol development, data acquisition and analysis
BMC Bioinformatics 2009, 10:390
Identification, Expression Pattern, and Characterization of Mouse Glutaredoxin 2 Isoforms
Antioxidants & Redox Signaling. January 2009, 11(1): 1-14.
abstract
Link to the cover figure on the publisher's home page:
get PDF
Visualizing the von Willebrand factor/glycoprotein Ib-IX axis with a
platelet-type von Willebrand disease mutation
(Blood. Prepublished online Oct 6, 2009; doi:10.1182/blood-)
A simple method for multiday imaging of slice cultures.
Microscopy Research and Technique. 2009 Jun 29.
abstract
Endothelial cell adhesion, signaling, and morphogenesis in fibroblast-derived matrix
Matrix Biology Matrix Biology ) 273–283. See line item 4 at abstract
Cohesin regulates VSG monoallelic expression in trypanosomes.
J Cell Biol. 2009 Jul 27;186(2):243-54.
abstract
Shack-Hartmann? wave front measurements in cortical tissue for deconvolution of large three-dimensional mosaic transmitted light BRIGHTFIELD micrographs.
Journal of Microscopy Vol. 233, Pt 2, 2009 pp 275-289 abstract
2008
Altered Na+/Ca2+-exchanger activity due to downregulation of Na+/K+-ATPase alpha2-isoform in heart failure.
Cardiovasc Res. 2008 Apr 1;78(1):71-8. Epub 2008 Jan 17. Erratum in: Cardiovasc Res. 2008 Jul 15;79(2):352.
Expression, transport, and axonal sorting of neuronal CCL21 in large dense-core vesicles.
The FASEB Journal. 2008;22:
Peroxisome fission in Hansenula polymorpha requires Mdv1 and Fis1, two proteins also involved in mitochondrial fission.
Traffic Sept 2008, (9):
Deconvolution allows reliable imaging of living cells at low fluorescence level.
Poster presented at the ELMI 2008 meeting.
get PDF
A Sphingolipid Inhibitor Induces a Cytokinesis Arrest and Blocks Stage Differentiation in Giardia lamblia{triangledown}
Antimicrobial Agents and Chemotherapy, February 2008, p. 563-569, Vol. 52, No. 2 on-line
Dendritic Spine Morphology Determines Membrane-Associated? Protein Exchange between Dendritic Shafts and Spine Heads
Cerebral Cortex, doi:10.1093/cercor/bhn118
on-line
Achieving cellular resolution for in vivo retinal images of transgenic GFAP-GFP mice via image processing
Optics Express, Vol. 16, Issue 11, pp.
on-line
Inn1 couples contraction of the actomyosin ring to membrane ingression during cytokinesis in budding yeast.
Nature Cell Biology 10, 395 - )
Published online: 16 March 2008|doi:10.1038/ncb1701
Yu Zhang, SoHee? Kwon, Teppei Yamaguchi, et al.
Molecular and Cellular Biology, March 2008, p. , Vol. 28, No. 5 on-line
2007
Plasma Membrane Sterol Distribution Resembles the Surface Topography of Living
MBC Vol. 18, Issue 1, 211-228, January 2007 get pdf
Aging associated with mild dyslipidemia reveals that COX-2 preserves dilation despite endothelial dysfunction.
Am J Physiol Heart Circ Physiol. 2007 Jan;292(1):H451-8.
Epub 2006 Sep 15.
Nuclear repositioning of the VSG promoter during developmental silencing in Trypanosoma brucei.
J Cell Biol. 2007 Jan 15;176(2):133-9.
Depletion of membrane cholesterol eliminates the Ca2+-activated component of outward potassium current and decreases membrane capacitance in rat uterine myocytes.
The Journal of Physiology March 2007
The Na+/K+-ATPase alpha2-isoform regulates cardiac contractility in rat cardiomyocytes.
Cardiovasc Res. 2007 Jul 1;75(1):109-17. Epub 2007 Mar 24.
Nuclear architecture underlying gene expression in Trypanosoma brucei.
Trends Microbiol. 2007 Jun;15(6):263-70. Review.
synthesis in Escherichia coli. J Bacteriol. 2007 Aug;189(15):. Epub 2007
May 18.
Dopamine receptor-interacting protein 78 acts as a molecular chaperone for Ggamma
subunits before assembly with Gbeta
J Biol Chem. 2007 May 4;282(18):.
Epub 2007 Mar 15.
The Three-Dimensional? Structure of Human Interphase Chromosomes Is Related to the Transcriptome Map. Molecular and Cellular Biology, June 2007, p. , Vol. 27, No. 12
Evidence that differential packaging of the major platelet granule proteins von Willebrand factor and fibrinogeen can support their differential release. Journal of Thrombosis and Haemostasis July 2007.
Hydrodynamic flow-mediated protein sorting on the cell surface of trypanosomes.
Cell , 505-515
Dexamethasone treatment of post-MI rats attenuates sympathetic innervation of the infarct region.
J Appl Physiol. 2007 Oct 4;
A highly reliable and budget-friendly Peltier-cooled camera for biological fluorescence imaging microscopy
Journal of Microscopy 228 (3), 264271.
doi:10.1111/j..2007.01858.x
The lipid droplet binding domain of hepatitis C virus core protein is a major determinant for efficient virus assembly
J. Biol. Chem, 10.1074/get pdf
Platelet secretion: indiscriminately spewed forth or highly iorchestrated?
Journal of Thrombosis and Haemostasis 5:
FtsZ directs a second mode of peptidoglycan synthesis in Escherichia coli
J. Bacteriol. doi:10.1128/JB.
Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain.
Nature Methods 4
SO, a protein involved in hyphal fusion in Neurospora crassa, localizes to septal plugs.
http://www.ncbi.nlm.nih.gov/pubmed/17099082?dopt=Citation
High resolution confocal microscopy and nano-scale distance measurements show difference in 3D confirmation between active and inactive mouse B-major Globin Loci?
get pdf
2006
The Level and Integrity of Synaptic Input Regulates Dendrite Structure.
J. Neuroscience, February 1, 2006; 26(5):1539 –1550
abstract
Technology feature Microscopy: Something to see. Light microscopy is undergoing a renaissance, with a huge range of tools and techniques for gathering biological data with unprecedented speed and resolution.
NATURE. Vol. 443,26 October 2006.
Seven transmembrane receptor core signaling complexes are assembled prior to plasma membrane trafficking.
J. Biol. Chem. 2006 Nov 10;281(45):
Epub 2006 Sep 7.
Cell Cycle-dependent Recruitment of Telomerase RNA and Cajal Bodies to Human Telomeres.
Mol. Biol. Cell Vol. 17, Issue 2, 944-954, February 2006 abstract
Depletion of cellular cholesterol inhibits membrane binding and higher-order multimerization of human immunodeficiency virus type 1 Gag
doi:10.1016/j.virol.2006.10.011
Septum Enlightenment: Assembly of Bacterial Division Proteins
Journal of Bacteriology, January 2006, p. 19-27, Vol. 188, No. 1
Cover
Novel dermo-epidermal equivalents on silk fibroin- based formic acid-crosslinked three-dimensional nonwoven devices with prospective applications in human tissue engineering/regeneration/repair.
International Journal of Molecular medicine 18, 241-247, 2006.
get pdf
Visualization of mRNA translation in living cells, 2006 October 9
J Cell Biol 175(1):67-76
IQGAP1 stimulates actin assembly through the N-WASP-ARP2/3 pathway.
J. Biol. Chem, 10.1074/
get pdf
.Essential role of PKCdelta in platelet signaling, alpha IIbbeta 3 activation, and thromboxane A2release1.
J Biol Chem. 2006 Aug 8; Epub ahead of print
PMID: PubMed. as supplied by publisher
Colchitaxel, a coupled compound made from microtubule inhibitors colchicine and paclitaxel.
Beilstein Journal of Organic Chemistry 2006, 2:13
. doi:10.1186/Interactions between GABA-B(1) receptors and Kir 3 inwardly rectifying potassium channels.
Cell Signal. 2006 May 23;
Epub ahead of print
Restoring depressed HERG K+ channel function as a mechanism for insulin treatment of abnormal QT prolongation and associated arrhythmias in diabetic rabbits.
Am J Physiol Heart Circ Physiol. 2006 Sep;291(3):H1446-H1455. Epub 2006 Apr 14.
PMID: PubMed. as supplied by publisher
Functional beta-adrenergic receptor signalling on nuclear membranes in adult rat and mouse ventricular cardiomyocytes.
Cardiovasc Res. 2006 Jul 1;71(1):69-78. Epub 2006 Mar 24.
PMID: PubMed.in process
Correlation of abnormnal mitochondial distribution in mouse oocytes with reduces developmental competence.
Tohuku J. Exp.Med., 2006, 210, 137-144
Dynamin-related proteins Vps1p and Dnm1p control peroxisome abundance in Saccharomyces cerevisiae.
J Cell Sci. 2006 Oct 1;119(Pt 19):. Epub 2006 Sep 12.
PubMed. as supplied by publisher
Polarized transport of Alzheimer Amyloid Precursor Protein is mediated by adaptor complex AP-1B
get pdf
2005
Roles of Ca(2+)and the Ca(2+)- Sensing Receptor (CARS) in the Expression of Inducible NOS ( Nitric Oxide Synthase)-2 and Its BH4 (Tetrahydrobiopterin)-Dependent Activation in Cytokine-Stimulated? Adult Human Astrocytes.
Journal of Cellular Biochemistry 96
Solube amyloid beta-peptide and myelin basic protein strongly stimulate, alone and in synergism with combined pro-inflammatory cytokines, the expression of functional nitric oxide synthase-2 in normal adult human astrocytes.
International Journal of Molecular Medicine , 2005
Ultrafine particles cross cellular membranes by non-phagocytic mechanisms in lungs and in cultured cells.
Environ Health Perspect (2005) 113
Improved visualization and quantitative analysis of fluorescent membrane sterol in polarized hepatic cells
Journal of Microscopy, Vol. 220, Pt 1 October 2005, pp. 47-64
Sub-cellular distribution of endothelin signaling pathway components in ventricular myocytes and heart: lack of preformed caveolar signalosomes
J Mol Cell Cardiol. (2005 Apr) 38(4):665-76.
The Steady-State? Distribution of Glycosyltransferases Between the Golgi Apparatus and the Endoplasmic Reticulum is Approximately 90:10
Traffic (2005); 6, 978-990. 1-13 Blackwell Munksgaard
2004
Dissection of a Natural RNA Silencing Process in the Drosophila melanogaster Germ Line
Mol Cell Biol. 2004 August; 24(15): 6742-6750.
get pdf
Multi-dimensional time-correlated single photon counting (TCSPC) fluorescence lifetime imaging microscopy (FLIM) to detect FRET in cells
Journal of Microscopy, Vol. 215, Pt 1 July 2004, pp. 1-12
get pdf
Imaging of Single mRNAs in the Cytoplasm of Living Cells, Live Cell Imaging: A Laboratory Manual
Goldman RD and Spector DL, 603-615. Cold Spring Harbor Laboratory (2004 October)
Chronically elevated endothelin levels reduce pulmonary vascular reactivity to nitric oxide.
Am J Respir Crit Care Med. 2005 Mar 1;171(5):506-13. Epub 2004 Dec 3.
), Xavier Darzacq, Shailesh M Shenoy, Dahlene Fusco, Susan M Janicki, David L Spector, Robert H SingerDynamics of Single mRNPs in Nuclei of Living Cells
Science (2004 June ) pp
Dynamics of DNA Double-Strand? Breaks Revealed by Clustering of Damaged Chromosome Domains
Science (2004) Vol ) pp 92-95
Characterization of a non-mitochondrial type I phosphatidylserine decarboxylase in Plasmodium falciparum
Molecular Microbiology (2004) 51 (1); pp 33-46
Immunolocalization of TASK-3 (KCNK9) to a subset of cortical neurons in the rat CNS
Biochemical and Biophysical Research Communications (2004) 319 pp 525-530
Rendering images in 3-D, New software tools provide functional beauty from 2-D slices
The Scientist (2004) 18;8 pp 40-42
Activation-Induced? Polarized Recycling Targets T Cell Antigen Receptors to the Immunological Synapse; Involvement of SNARE Complexes
Immunity (2004) 20(5) pp 577-588
KvLQT1 modulates the distribution and biophysical properties of HERG: A novel alpha-subunit interaction between delayed-rectifier currents
J. Biol. Chem. (2004) Vol. 279 (2) pp
Kinetics of endocytosis and recycling of the GPIanchored variant surface glycoprotein in Trypanosoma brucei
Journal of Cell Science (2004) 117; pp
Vitamin C controls the cystic fibrosis transmembrane conductance regulator chloride channel
Proc Natl Acad Sci (2004) vol 101 no 10; pp
Ca2+ Homeostasis during Mitochondrial Fragmentation and Perinuclear Clustering Induced by hFis1
J Biol Chem. (2004) 21;279(21) pp
Dynamic changes in microtubular cytoskeleton of human postmature oocytes revert after ooplasm transfer
Fertil Steril. (2004) 81 (2) pp 323-331
Distinct subcellular targeting of fluorescent nicotinic alpha3beta4 and serotoninergic 5-HT3A receptors in hippocampal neurons
Eur J Neurosci. (2004) 19(4) pp 855-862
Novel regulation of mitotic exit by the Cdc42 effectors Gic1 and Gic2
The Journal of Cell Biology (2004) Volume 164 (2) pp 219-231
The Drosophila pericentrin-like protein is essential for cilia/flagella function, but appears to be dispensable for mitosis
The Journal of Cell Biology, Volume 165(5) pp 673-683
Spontaneous Cardiomyocyte Differentiation From Adipose Tissue Stroma Cells
Circ Res. (2004) 94(2) pp 223-229
AMPA-receptor activation regulates the diffusion of a membrane marker in parallel with dendritic spine motility in the mouse hippocampus
The Journal of Physiology (2004); In Press: 10.1113/jphysiol.2004.
Focusing light on infection in four dimensions
Cellular Microbiology (2004) 6 (4), pp 333-343
Deconvolution of confocal images of dihydropyridine and ryanodine receptors in developing cardiomyocytes
Journal of Appl Physiol (2004) 97, pp
Keratin 8/18 breakdown and reorganization during apoptosis
Experimental Cell Research (2004) 297(1), pp 11-26
Relating microstructure to rheology of a bundled and cross-linked F-actin network in vitro
Proc Natl Acad Sci U S A. (2004) june 21 (Epub ahead of print)
Ca2+ uptake in mitochondria occurs via the reverse action of the Na+/Ca2+ exchanger in metabolically inhibited MDCK cells
Am J Physiol Renal Physiol (2004) 286: F784-794
Sheet Preparations Expose the Dermal Nerve Plexus of Human Skin and Render the Dermal Nerve End Organ Accessible to Extensive Analysis
J Invest Dermatol (2004) 122 (1); pp 177-182
Input from the presubiculum to dendrites of layer-V neurons of the medial entorhinal cortex of the rat
Brain Research (1), pp 1-12
Neuropathy Target Esterase and Its Yeast Homologue Degrade Phosphatidylcholine to Glycerophosphocholine in Living Cells
The Journal Of Biological Chemistry (2004) Vol. 279, No. 23, pp.
2003
Reverse Structural and Gap-Junctional? Remodeling After Prolonged Atrial Fibrillation in the Goat
Circulation (2003) 107; pp
Differential cellular localization among mitotic cyclins from Saccharomyces cerevisiae: a new role for the axial budding protein Bud3 in targeting Clb2 to the mother-bud neck
J Cell Sci. (2003) ;116(Pt 20) pp
Growth Hormone-Releasing? Hormone (GHRH) Neurons in GHRH-Enhanced Green Fluorescent Protein Transgenic Mice: A Ventral Hypothalamic Network
Endocrinology (2003) 144(6) pp
Inheritance of Polycomb-dependent chromosomal interactions in Drosophila
Genes & Development (2003) ;17; pp
Functional endothelin receptors are present on nuclei in cardiac Ventricular myocytes
J.Biol.Chem. (2003) Vol 278, No. 31 pp
Antidepressant-induced switch of b1-adrenoceptor trafficking as a mechanism for drug action
J.Biol.Chem. (2003) 278 pp
Fluorescent ligands, antibodies, and proteins for the study of receptors
Pharmacology & Therapeutics (2003) Vol 100 (2) pp 101-118
Measurements of the free luminal ER Ca2+ concentration with targeted cameleon fluorescent proteins
Cell Calcium (2003) 34(2) pp 109-119
Development of rat CA1 neurones in acute vs organotypic slices: role of experience in synaptic morphology and activity
J Physiol. (2003) 550(Pt 1) pp 135-147
Functional and spatial segregation of secretory vesicle pools according to vesicle age
Nature ) pp 176-180
Macrophage podosomes assemble at the leading lamella by growth and fragmentation
The Journal of Cell Biology (2003) Volume 161, Number 4, pp 697-705
Single mRNA Molecules Demonstrate Probabilistic Movement in Living Mammalian Cells
Current Biology (2003) Vol 13, pp 161-167
Type 1 Insulin-like Growth Factor Receptor (IGF-IR) Signaling Inhibits Apoptosis Signal-regulating Kinase 1 (ASK1)
J.Biol.Chem. (2003) Vol. 278, No. 15, pp 13325-13332
Alternative Splicing of cGMP-Dependent Protein Kinase I in Angiotensin-Hypertension? Novel Mechanism for Nitrate Tolerance in Vascular Smooth Muscle
Circ Res. (2003) 93, pp 805-812
Trans-Cellular? Proliferating Cell Nuclear Antigen Gene Activation in Cerebral Vascular Smooth Muscle by Endothelial Oxidative Injury In Vivo
Arterioscler Thromb Vasc Biol. (2003) 23, pp
Calponin Repeats Regulate Actin Filament Stability and Formation of Podosomes in Smooth Muscle Cells
Molecular Biology of the Cell (2003) Vol 14, pp
The roles of microtubule-based motor proteins in mitosis: comprehensive RNAi analysis in the Drosophila S2 cell line
The Journal of Cell Biology (2003) Volume 162, Number 6 pp
Endocytosis of a Glycosylphosphatidylinositol-anchored Protein via Clathrin-coated Vesicles, Sorting by Default in Endosomes, and Exocytosis via RAB11-positive Carriers
Molecular Biology of the Cell (2003) Vol. 14, pp 2029-2040
The small molecule Hesperadin reveals a role for Aurora B in correcting kinetochore microtubule attachment and in maintaining the spindle assembly checkpoint
The Journal of Cell Biology (2003), Vol 161( 2), pp 281-294
ssDNA-dependent colocalization of adeno-associated virus Rep and herpes simplex virus ICP8 in nuclear replication domains
Nucleic Acids Research (2003); Vol. 31, No. 21, pp
Kinesin Superfamily Protein 2A (KIF2A) Functions in Suppression of Collateral Branch Extension
Cell (2003) Vol 114, Issue 2, pp 229-239
A new retroelement constituted by a natural alternatively spliced RNA of murine replication-competent retroviruses
EMBO J. (2003) 15;22(18) pp
Epithelial tube morphogenesis during Drosophila tracheal development requires Piopio, a luminal ZP protein
Nature Cell Biology (2003) 5(10) pp 895-901
Stimulation of Single Isolated Adult Ventricular Myocytes within a Low Volume Using a Planar Microelectrode Array
Biophysical Journal (2003) Vol.85 pp
Gelation of soy glycinin; influence of pH and ionic strength on network structure in relation to protein conformation
Food Hydrocolloids (2003) Vol 17(3) pp 365-377
Intracellular Transport of Calcium from Plasma Membrane to Mitochondria in Adrenal H295R Cells: Implication for Steroidogenesis
Endocrinology (2003) ;144(10), pp
Targeting the Variable Surface of African Trypanosomes with Variant Surface Glycoprotein-Specific?, Serum-Stable? RNA Aptamers
Eukarotic Cell (2003) pp 84-94
Evidence of a role for Munc18-2 and microtubules inmast cell granule exocytosis
Journal of Cell Science (2003) 116, pp 325-334
Sustained Ca2+ Transfer across Mitochondria Is Essential for Mitochondrial Ca2+ Buffering, Store-operated Ca2+ Entry, and Ca2+ Store Refilling
J. Biol. Chem. (2003) 278: pp
Intracellular localisation of human HIF-1a hydroxylases: implications for oxygen sensing
Journal of Cell Science (2003) 116, pp
The expression level determines the surface distribution of the transferrin receptor in Trypanosoma brucei
Molecular Microbiology (2003) 47(1) pp 23-35
Characterization of the Endosomal Sorting Signal of the Cation-Dependent? Mannose 6-Phosphate Receptor
J.Biol.Chem. (2003) Vol 278, No. 27 pp
Real-Time? Visualization of ZBP1 Association with beta-actin mRNA during Transcription and Localization
Current Biology (2003) Vol. 13 pp 199-207
Structural Adaptation of the Nuclear Pore Complex in Stem Cell-Derived? Cardiomyocytes
Circ Res (2003) 92 pp 444-452
Spontaneous Cardiomyocyte Differentiation From Adipose Tissue Stroma Cells
Circ. Res. (2003); 10.1161/01.RES..43271.47
A Dual Role of the GTPase Rac in Cardiac Differentiation of Stem Cells
Molecular Biology of the Cell (2003) Vol. 14, pp
Characterisation of PGs1, a subunit of a protein complex co-purifying with tubulin polyglutamylase
J Cell Sci. (2003);116(Pt 20), pp
Molecular requirements for actin-based lamella formation in Drosophila S2 cells
The Journal of Cell Biology (2003) Volume 162, Number 6 pp
Visualization of Microtubule Growth in Cultured Neurons via the Use of EB3-GFP (End-Binding Protein 3-Green Fluorescent Protein)
The Journal of Neuroscience (2003) 23(7) pp
Cell surface orifices of caveolae and localization of caveolin to the necks of caveolae in adipocytes
Mol. Biol. Cell (2003) 14 pp
Condensed chromatin domains in the mammalian nucleus are accessible to large macromolecules
EMBO reports (2003) 4, pp 861-866
Telomere-independent homologue pairing and checkpoint escape of accessory ring chromosomes in male mouse meiosis
The Journal of Cell Biology (2003) Vol. 162, Number 5, pp 795-807
Synaptic contacts between identified neurons visualized in the confocal laserscanning microscope. Neuroanatomical tracing combined with immunofluorescence detection of postsynaptic density proteins and target neuron-markers
J. Neuroscience Methods (2003) 128 pp 129-142
2002
Calreticulin differentially modulates calcium uptake and release in the endoplasmic reticulum and mitochondria
J. Biol.Chem. (2002) 277 pp
Stem cell differentiation requires a paracrine pathway in the heart
The FASEB Journal (2002) 16 pp
Long-lasting modulation of synaptic input to Purkinje neurons by Bergmann glia stimulation in rat brain slices
Journal of Physiology (2002) 545.2 pp 581-593
N-cadherin-dependent cell-cell contact regulates Rho GTPases and ß-catenin localization in mouse C2C12? myoblasts
The Journal of Cell Biology (2002) Volume 158, Number 5, pp 953-965
Visualization of replication initiation and elongation in Drosophila
The Journal of Cell Biology (2002), Volume 159, Number 2, pp 225-236
Carcinogenesis and translational controls: TACC1 is down-regulated in human cancers and associates with mRNA regulators
Oncogene (2002) 21, pp 5619 - 5630
Divalent Rab effectors regulate the sub-compartmental organization and sorting of early endosomes
Nature Cell Biology (2002) 4, pp 124-133
Mesoscopic dynamics of colloids simulated with dissipative particle dynamics and fluid particle model
J Mol Model (2002) 8, pp 33-43
Effect of immunosuppressive agents on glucocorticoid receptor function in A6 cells
Am J Physiol Renal Physiol (2002) 283, pp F254-F261
Nowa, a novel protein with minicollagen Cys-rich domains, is involved in nematocyst formation in Hydra
Journal of Cell Science (2002) 115, pp
The Human Rho-GEF Trio and Its Target GTPase RhoG Are Involved in the NGF Pathway, Leading to Neurite Outgrowth
Current Biology (2002), Vol. 12, pp 307-312 get pdf
c-Abl is an effector of Src for growth factor-induced c-myc expression and DNA synthesis
The EMBO Journal (2002) Vol 21 No 4 pp 514-524
Multiple spatiotemporal modes of actin reorganization by NMDA receptors and voltage-gated Ca21 channels
PNAS (2002) vol.99 no. 22 pp
DdNek2?, the first non-vertebrate homologue of human Nek2, is involved in the formation of microtubuleorganizing centers
Journal of Cell Science (2002) 115, pp
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Accumulation of a GPI-Anchored Protein at the Cell Surface Requires Sorting at Multiple Intracellular Levels
Traffic (2002), 3, pp 547-559
Imaging Sites of Receptor Dephosphorylation by PTP1B on the Surface of the Endoplasmic Reticulum
Science (2002) pp
Planar cell polarization requires Widerborst, a B' regulatory subunit of protein phosphatase 2A
Development (2002) 129, pp
Mechanisms of acid secretion in pseudobranch cells of rainbow trout Oncorhynchus
The Journal of Experimental Biology (2002) 205 pp 2943-2954
Ribosomal genes in focus: new transcripts label the dense fibrillar components and form clusters indicative of "Christmas trees" in situ
The Journal of Cell Biology (2002) Volume 157, Number 5, pp 743-748 get pdf
Stochastic Patterns in Globin Gene Expression Are Established prior to Transcriptional Activation and Are Clonally Inherited
Molecular Cell (2002) Vol. 9, pp
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Deconvolution improves colocalization analysis of multiple fluorochromes in 3D confocal data sets more than filtering techniques
Jo. Micr. (2002) V 208, Pt 2, pp 134-147
Calreticulin reveals a critical Ca2+ checkpoint in cardiac myofibrillogenesis
The Journal of Cell Biology (2002) Volume 158, Number 1, pp 103-113 get pdf
Searching for active ribosomal genes in situ: light microscopy in light of the electron beam
Journal of Structural Biology (2002) 140 pp 227-231
Biogenesis of N-Cadherin-dependent? Cell-Cell? Contacts in Living Fibroblasts Is a Microtubuledependent Kinesin-driven Mechanism
Molecular Biology of the Cell Vol. (2002) 13, pp 285-301 get pdf
Dmoesin controls actin-based cell shape and polarity during Drosophila melanogaster oogenesis
Nature Cell Biology (2002) 4, pp 782-789
Dictyostelium EB1 Is a Genuine Centrosomal Component Required for Proper Spindle Formation
Molecular Biology of the Cell (2002) Vol. 13, pp
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Dynamics of tight and adherens junctions under EGTA treatment.
J Membr Biol. (2002) Jul 15;188(2):151-62
Insulin Causes Fatty Acid Transport Protein Translocation and Enhanced Fatty Acid Uptake in Adipocytes
Developmental Cell (2002) 2, pp 477-488
Large-scale Chromatin Organization and the Localization of Proteins Involved in Gene Expression in Human Cells
J.Histochem.Cytochem. (2002) 50, pp
Comment on 'Generalized approach for accelerated maximum likelihood based image restoration applied to three-dimensional fluorescence microscopy', by L. H. Schaefer, D. Schuster and H. Herz, J. Microsc. 204, )
Journal of Microscopy (2002), Vol. 208, Pt 1, pp 1-2
Tracing tools to resolve neural circuits
Network: Comput. Neural Syst. (2002) 13, pp 327-342
Double-Label? Confocal Laser-Scanning? Microscopy, Image Restoration, and Real-Time? Three-Dimensional? Reconstruction to Study Axons in the Central Nervous System and Their Contacts With Target Neurons
Applied Immunohistochemistry & Molecular Morphology (2002) 10(1), pp 85-95
Automated high-throughput electron tomography by pre-calibration of image shifts
Journal of Microscopy (2002) Vol 205, Pt2, pp 187-200 get pdf
2001
Nuclear Retention of ATM at Sites of DNA Double Strand Breaks
The Journal Of Biological Chemistry (2001) Vol. 276, No. 41, pp
Mitochondria Recycle Ca2+ to the Endoplasmic Reticulum and Prevent the Depletion of Neighboring Endoplasmic Reticulum Regions
The Journal Of Biological Chemistry (2001) Vol. 276, No. 31, pp
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Acid Prohormone Sequence Determines Size, Shape, and Docking of Secretory Vesicles in Atrial Myocytes
Circ Res.(2001) 89:e23-e29
A Specific Role of Phosphatidylinositol 3-Kinase g: A Regulation of Autonomic Ca2+ Oscillations in Cardiac Cells
The Journal of Cell Biology (2001) Volume 152, Number 4, pp 717-727 get pdf
A novel p21-activated kinase binds the actin and microtubule networks and induces microtubule stabilization
The Journal of Cell Biology (2001) Volume 155, Number 6, pp get pdf
Efficient assembly of an HIV-1 MLV Gag-chimeric virus in murine cells
PNAS (2001) vol 98 no26 pp.
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Distribution of the Escherichia coli structural maintenance of chromosomes (SMC)-like protein MukB in the cell
Molecular Microbiology (2001) 42(5), pp
Over-expression of NCS-1 in AtT-20? cells affects ACTH secretion and storage
Molecular and Cellular Endocrinology (2001) 184, pp 51-63
Arrangements of macro- and microchromosomes in chicken cells
Chromosome Research (2001) 9, pp 569-584 get pdf
The Positioning and Dynamics of Origins of Replication in the Budding Yeast Nucleus
J Cell Biol (2001) 152, pp 385-400
Monitoring S phase progression globally and locally using BrdU incorporation in TK+ yeast strains
Nucleic Acids Research (2001) Vol 29, No 7 pp get pdf
Semi-automated analysis of three-dimensional track images
Radiation Measurements (2001) 34 pp 161-165
DNA/polyethylenimine transfection particles: Influence of ligands, polymer size, and PEGylation on internalization and gene expression
AAPS PharmSci? (2001) 3 (3) article 21
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Directed Inhibition of Nuclear Import in Cellular Hypertrophy
THE JOURNAL OF BIOLOGICAL CHEMISTRY (2001) Vol. 276, No. 23, pp
Swimbladder gas gland cells cultured on permeable supports regain their characteristic polarity
The Journal of Experimental Biology (2001) 204, pp
Kinesin-dependent movement on microtubules precedes actin-based motility of vaccinia virus
Nature Cell Biology (2001) 3, pp 992 – 1000
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Lysosomal Hydrolase Mannose 6-Phosphate Uncovering Enzyme Resides in the trans-Golgi Network
Molecular Biology of the Cell (2001) Vol 12, pp
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Cellular COPII Proteins Are Involved in Production of the Vesicles That Form the Poliovirus Replication Complex
Journal Of Virology (2001) Vol 75(20), pp
MuSK induces in vivo acetylcholine receptor clusters in a ligand-independent manner
The Journal of Cell Biology (2001) Volume 155, Number 7, pp
Non-isotopic mapping of ribosomal RNA synthesis and processing in the nucleolus
Chromosoma (2001) 110, pp 460-470
Non destructive analysis of the wax layer of apple (Malus domestiva Borkh) by means of confocal laser scanning microscopy
Planta (2001) 213, pp 525-533
Box C/D small nucleolar RNA trafficking involves small nucleolar RNP proteins, nucleolar factors and a novel nuclear domain
The EMBO Journal (2001) Vol.20 N019 pp
Peturbation of the tight junction permeability barrier by occludin loop peptides activates b-catenin/TCF/LEF-mediated transcription
EMBO reports (2001) vol 2, no 4, pp 306-312
Kinectin Is a Key Effector of RhoG Microtubule-Dependent? Cellular Activity
MOLECULAR AND CELLULAR BIOLOGY (2001) pp
SDF-1-induced actin polymerization and migration in human hematopoietic progenitor cells
Experimental Hematology ) pp
The nucleoporin Nup153 is required for nuclear pore basket formation, nuclear pore complex anchoring and import of a subset of nuclear proteins
The EMBO Journal (2001) Vol.20 pp
Morphological And Functional Properties Of Rat Dentate Granule Cells After Adrenalectomy
Neuroscience Vol. (2001) 108, No. 2, pp 263-272
A Novel 14-Kilodalton Protein Interacts with the Mitogen-activated Protein Kinase Scaffold MP1 on a Late Endosomal/Lysosomal Compartment
The Journal of Cell Biology (2001) Volume 152, Number 4, pp 765-776 get pdf
2000
The Yersinia Protein Kinase A Is a Host Factor Inducible RhoA/Rac-binding Virulence Factor
The Journal Of Biological Chemistry (2000) Vol. 275, No. 45, pp
The Tail Domain of Myosin M Catalyses Nucleotide Exchange on Rac1 GTPases and Can Induce Actin-Driven? Surface Protrusions
Traffic (2000) 1 pp 399-41
The yeast Sgs1p helicase acts upstream of Rad53p in the DNA replication checkpoint and colocalizes with Rad53p in S-phase-specific foci
Genes & Development (2000) 14 pp 81-96
The Tail Domain of Myosin M Catalyses Nucleotide Exchange on Rac1 GTPases and Can Induce Actin-Driven? Surface Protrusions
Traffic (2000) 1 pp 399-410
GTP Hydrolysis by Ran Is Required for Nuclear Envelope Assembly
Molecular Cell (2000) 5: pp
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Expression-site-associated gene 8 (ESAG8) of Trypanosoma bruceiis apparently essential and accumulates in the nucleolus
Journal of Cell Science (2000) 113, pp get pdf
Both Calmodulin and the Unconventional Myosin Myr4 Regulate Membrane Trafficking Along the Recycling Pathway of MDCK Cells
Traffic (2000) 1: pp 494-503
Sulfonylurea receptor ligands modulate stretch-induced ANF secretion in rat atrial myocyte culture
Am J Physiol Heart Circ Physiol (2000) 278 pp H2028-H2038
Role of Actin Cortex in the Subplasmalemmal Transport of Secretory Granules in PC-12 Cells
Biophysical Journal (2000) Volume 78 pp
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B-type granule containing protrusions and interconnections between amyloplasts in developing wheat endosperm revealed by transmission electron microscopy and GFP expression
Journal of Experimental Botany (2000) Vol 51, No 349, pp
Differential subcellular localization of ENaC subunits in mouse kidney in response to high- and low-Na diets
Am J Physiol Renal Physiol (2000) 279: F252-F258
A fluorescent reporter gene as a marker for ventricularspecification in ES-derived cardiac cells
FEBS Letters (2000) 478 pp 151-158
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A versatile assay to study cellular uptake of gene transfer complexes by flow cytometry
Biochimica et Biophysica Acta pp 237-243
Mutagenesis Reveals a Role for ABP/GRIP Binding to GluR2? in Synaptic Surface Accumulation of the AMPA Receptor
Neuron (2000) 27, pp 313-325
Swim bladder gas gland cells produce surfactant: in vivo and in culture
Am J Physiol Regulatory Integrative Comp Physiol (2000) 279, pp R2336-R2343
Apical endocytosis in rat hepatocytes in situ involves clathrin, traverses a subapical compartment, and leads to lysosomes
Gastroenterology (2000) 119, pp
Formation of Multilayers in the Caco-2 Cell Culture Model: A Confocal Laser Scanning Microscopy Study
Pharmaceutical Research (2000), Vol. 17, No. 4, pp 460-465
Dictyostelium myosin IK is involved in the maintenance of cortical tension and affects motility and phagocytosis
J Cell Science (2000) 113, pp 621-633
Distinct Membrane Domains on Endosomes in the Recycling Pathway Visualized by Multicolor Imaging of Rab4, Rab5, and Rab11
J Cell Biology (2000) 149, 4, pp 901-913
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Three-dimensional organization of microtubules in tumor cells studied by confocal laser scanning microscopy and computer-assisted deconvolution and image reconstruction
Cells Tissues Organs (2000);167(1) pp 1-8
Use of Green Fluorescent Protein Color Variants Expressed on Stable Broad-Host-Range? Vectors to Visualize Rhizobia Interacting with Plants
MPMI (2000) Vol. 13, No. 11 pp
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Gap junctional remodeling in relation to stabilization of atrial fibrillation in the goat
Cardiovascular Research (2000) 46 pp 476-486
Characterization of TCL, a New GTPase of the Rho Family related to TC10 and Cdc42
The Journal of Biological Chemistry (2000) Vol 275, No 46, pp
1999
Dynamics of the nuclear lamina as monitored by GFP-tagged A-type lamins
J Cell. Science 112, (1999) pp
Imaging properties in two-photon excitation microscopy and effects of refractive-index mismatch in thick specimens
Applied Optics (1999) V 38, No.28, pp
Adapting a Compact Confocal Microscope System to a Two-Photon? Excitation Fluorescence Imaging Architecture
Microscopy Research and Technique (1999) 47, pp 196-205 get pdf
Identification of Syntenin as a Protein of the Apical Early Endocytic Compartment in Madin Darby Canine Kidney Cells
The Journal of Biological Chemistry (1999) Vol 274, No 37, pp
Endocytic vesicles move at the tips of actin tails in cultured mast cells
Nature Cell Biology (1999) Vol 1 No 1 pp 72-74
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Analysis of CD44-containing Lipid Rafts: Recruitment of Annexin II and Stabilization by the Actin Cytoskeleton
J Cell Biology (1999) 147, 4, pp 843-854
Cytomography
Methods in Enzymology (1999) Vol 307 pp 108-118
Spatial relationship between transcription sites and chromosome territories
J Cell Biology (1999) 147, 1, pp 13-24
Chromosomes as well as chromosomal subdomains constitute distinct units in interphase nuclei
J Cell Science (1999) 112, pp
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Syntaxin 1 interacts with the LD subtype of voltage-gated Ca2+ channels in pancreatic b cells
Proc Natl Acad Sci USA (1999) Vol 96, pp , Cell Biology
1998
Autofluorescence of living cells
Journal of microscopy (1998) Vol 191 Pt 1, pp 1-7
The Distribution of Polycomb-Group? Proteins During Cell Division and Development in Drosophila Embryos: Impact on Models for Silencing
J of Cell Biology (1998) 141, 2, 4 pp 69-481
Deconvolution Combined with Digital Colocalization Analysis to Study the Spatial Distribution of Tight and Adherens Junction Proteins
Jo. of Computer-Assisted? Micr. (1998) V10 No. 3, pp 103-111
4Pi-Confocal Imaging in Fixed Biological Specimens
Biophysical Journal (1998) Volume 75 pp get pdf
Three-dimensional super-resolution with a 4Pi-confocal microscope using image restoration
Journal Of Applied Physics (1998) Volume 84, Number 8 pp get pdf
Time-gated fluorescence lifetime imaging and microvolume spectroscopy using two photon excitation
Journal of Microscopy (1998) Vol 191 Pt1 pp 39-51
1997
Autofluorescence as indicator of viability of living cells
XXXIX Symposium of the Society for Histochemistry 24-27 September 1997, Jena, Germany
Histochem Cell Biol (1997) 108 pp 257-285
Far-Field? fluorescence microscopy with three-dimensional resolution in the 100-nm Range
Journal of Microscopy (1997) Vol 187 Pt1, pp 1-7
1996
Avalanche photodiode detection with object scanning and image restoration provides 2-4 fold resolution increase in two-photon fluorescence microscopy
Bioimaging 4 (1996) pp 187-197 get pdf
A quantitative comparison of two restoration methods as applied to confocal microscopy
Journal of Microscopy (1997), Volume 185, no. 3, Pages 354 - 365. abstract
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